4UV0 | pdb_00004uv0

Structure of a semisynthetic phosphorylated DAPK

Experimental Data Snapshot

  • Method:&nbspX-RAY DIFFRACTION
  • Resolution:&nbsp2.49 Å
  • R-Value Free:&nbsp
    0.242 (Depositor), 0.190 (DCC)&nbsp
  • R-Value Work:&nbsp
    0.193 (Depositor), 0.190 (DCC)&nbsp
  • R-Value Observed:&nbsp
    0.196&nbsp(Depositor)&nbsp

Starting Model: experimental
View more details

wwPDB Validation&nbsp &nbsp3D Report&nbspFull Report


This is version 1.1 of the entry. See complete&nbsphistory.&nbsp


Literature

Molecular Mechanisms Behind Dapk Regulation: How the Phosphorylation Activity Switch Works

Temmerman, K.,&nbspMertens, H.,&nbspRios, P.,&nbspSimon, B.,&nbspHuart, A.S.,&nbspPiljic, A.,&nbspDe Diego, I.,&nbspSvergun, D.,&nbspSchultz, C.,&nbspKoehn, M.,&nbspWilmanns, M.

To be published.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
DEATH-ASSOCIATED PROTEIN KINASE 1323Homo sapiensMutation(s): 1&nbsp
EC:&nbsp2.7.11.1
UniProt & NIH Common Fund Data Resources
Find proteins for&nbspP53355&nbsp(Homo sapiens)
Explore&nbspP53355&nbsp
Go to UniProtKB: &nbspP53355
PHAROS: &nbspP53355
GTEx: &nbspENSG00000196730&nbsp
Entity Groups &nbsp
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP53355
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands&nbsp1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
PGE
Query on PGE
Download Ideal Coordinates CCD File&nbsp
B [auth A]TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method:&nbspX-RAY DIFFRACTION
  • Resolution:&nbsp2.49 Å
  • R-Value Free:&nbsp 0.242 (Depositor), 0.190 (DCC)&nbsp
  • R-Value Work:&nbsp 0.193 (Depositor), 0.190 (DCC)&nbsp
  • R-Value Observed:&nbsp0.196&nbsp(Depositor)&nbsp
Space Group:&nbspP 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 49.559α = 90
b = 78.002β = 90
c = 108.861γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

View&nbspFull Validation Report



View more in-depth experimental data
Entry History&nbsp

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2015-08-12
    Type: Initial release
  • Version 1.1: 2024-01-10
    Changes: Data collection, Database references, Derived calculations, Other, Refinement description