4A0L | pdb_00004a0l

The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation.

Fischer, E.S.,&nbspScrima, A.,&nbspBohm, K.,&nbspMatsumoto, S.,&nbspLingaraju, G.M.,&nbspFaty, M.,&nbspYasuda, T.,&nbspCavadini, S.,&nbspWakasugi, M.,&nbspHanaoka, F.,&nbspIwai, S.,&nbspGut, H.,&nbspSugasawa, K.,&nbspThoma, N.H.

(2011) Cell&nbsp147: 1024

• PubMed:&nbsp22118460&nbspSearch on PubMed
• DOI:&nbsphttps://doi.org/10.1016/j.cell.2011.10.035
• Primary Citation of Related Structures: &nbsp
  4A08, 4A09, 4A0A, 4A0B, 4A0C, 4A0K, 4A0L, 4A11


• PubMed Abstract:&nbsp
  

  The DDB1-CUL4-RBX1 (CRL4) ubiquitin ligase family regulates a diverse set of cellular pathways through dedicated substrate receptors (DCAFs). The DCAF DDB2 detects UV-induced pyrimidine dimers in the genome and facilitates nucleotide excision repair. We provide the molecular basis for DDB2 receptor-mediated cyclobutane pyrimidine dimer recognition in chromatin. The structures of the fully assembled DDB1-DDB2-CUL4A/B-RBX1 (CRL4(DDB2)) ligases reveal that the mobility of the ligase arm creates a defined ubiquitination zone around the damage, which precludes direct ligase activation by DNA lesions. Instead, the COP9 signalosome (CSN) mediates the CRL4(DDB2) inhibition in a CSN5 independent, nonenzymatic, fashion. In turn, CSN inhibition is relieved upon DNA damage binding to the DDB2 module within CSN-CRL4(DDB2). The Cockayne syndrome A DCAF complex crystal structure shows that CRL4(DCAF(WD40)) ligases share common architectural features. Our data support a general mechanism of ligase activation, which is induced by CSN displacement from CRL4(DCAF) on substrate binding to the DCAF.

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Organizational Affiliation:&nbsp

Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, CH-4058 Basel, Switzerland.