3UEX | pdb_00003uex

Bovine beta-lactoglobulin complex with stearic acid


Experimental Data Snapshot

  • Method:&nbspX-RAY DIFFRACTION
  • Resolution:&nbsp2.10 Å
  • R-Value Free:&nbsp
    0.284 (Depositor), 0.280 (DCC)&nbsp
  • R-Value Work:&nbsp
    0.230 (Depositor), 0.230 (DCC)&nbsp
  • R-Value Observed:&nbsp
    0.235&nbsp(Depositor)&nbsp

Starting Model: experimental
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This is version 1.5 of the entry. See complete&nbsphistory.&nbsp


Literature

Bovine beta-lactoglobulin complex with stearic acid

Loch, J.I.,&nbspPolit, A.,&nbspBonarek, P.,&nbspOlszewska, D.,&nbspKurpiewska, K.,&nbspDziedzicka-Wasylewska, M.,&nbspLewinski, K.

(2012) Int J Biol Macromol&nbsp50: 1095-1102

  • DOI:&nbsphttps://doi.org/10.1016/j.ijbiomac.2012.03.002
  • Primary Citation of Related Structures: &nbsp
    3UEU, 3UEV, 3UEW, 3UEX

  • PubMed Abstract:&nbsp

    Lactoglobulin is a globular milk protein for which physiological function has not been clarified. Due to its binding properties lactoglobulin might serve as a carrier for bioactive molecules. Binding of 12-, 14-, 16- and 18-carbon saturated fatty acids to bovine β-lactoglobulin has been characterised by isothermal titration calorimetry and X-ray crystallography as a part of systematic studies of lactoglobulin complexes with ligands of biological importance. The thermodynamic parameters have been determined for lauric, myristic and palmitic acid complexes revealing systematic decrease of enthalpic and increase of entropic component of ΔG with elongation of aliphatic chain. In all crystal structures determined with resolution 1.9-2.1Å, single fatty acid molecule was found in the β-barrel in extended conformation with individual pattern of interactions. Location of a fatty acid in the binding site depends on the length of aliphatic chain and influences polar interactions between protein and ligand. Systematic changes of entropic component indicate important role of water in binding process.


  • Organizational Affiliation:&nbsp

    Jagiellonian University, Faculty of Chemistry, Department of Crystal Physics and Crystal Chemistry, Kraków, Poland.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Beta-lactoglobulin162Bos taurusMutation(s): 0&nbsp
UniProt
Find proteins for&nbspP02754&nbsp(Bos taurus)
Explore&nbspP02754&nbsp
Go to UniProtKB: &nbspP02754
Entity Groups &nbsp
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP02754
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method:&nbspX-RAY DIFFRACTION
  • Resolution:&nbsp2.10 Å
  • R-Value Free:&nbsp 0.284 (Depositor), 0.280 (DCC)&nbsp
  • R-Value Work:&nbsp 0.230 (Depositor), 0.230 (DCC)&nbsp
  • R-Value Observed:&nbsp0.235&nbsp(Depositor)&nbsp
Space Group:&nbspP 32 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 53.778α = 90
b = 53.778β = 90
c = 112.038γ = 120
Software Package:
Software NamePurpose
CrysalisProdata collection
MOLREPphasing
REFMACrefinement
CrysalisProdata reduction
SCALAdata scaling

Structure Validation

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Ligand Structure Quality Assessment&nbsp


Entry History&nbsp

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-11-09
    Type: Initial release
  • Version 1.1: 2012-04-18
    Changes: Database references
  • Version 1.2: 2012-06-20
    Changes: Database references
  • Version 1.3: 2017-11-08
    Changes: Refinement description
  • Version 1.4: 2023-09-13
    Changes: Data collection, Database references, Derived calculations, Refinement description
  • Version 1.5: 2024-10-30
    Changes: Structure summary