 Download MendeleyX-Ray Structure of a Dap-Kinase Calmodulin Complex
De Diego, I., Kuper, J., Lehmann, F., Wilmanns, M.To be published.
2W4J | pdb_00002w4j
X-ray structure of a DAP-Kinase 2-277
- PDB DOI: https://doi.org/10.2210/pdb2W4J/pdb
- Classification: TRANSFERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21
- Mutation(s): No 
- Deposited: 2008-11-27 Released: 2009-12-22 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.30 Å
- R-Value Free: 0.159 (Depositor), 0.170 (DCC) 
- R-Value Work: 0.131 (Depositor), 0.140 (DCC) 
- R-Value Observed: 0.132 (Depositor) 
Starting Model: experimental
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This is version 1.4 of the entry. See complete history. 
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| DEATH-ASSOCIATED PROTEIN KINASE 1 | 277 | Homo sapiens | Mutation(s): 0  EC: 2.7.11.1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P53355 (Homo sapiens) Explore P53355  Go to UniProtKB:  P53355 | |||||
PHAROS:  P53355 GTEx:  ENSG00000196730  | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P53355 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ADP Query on ADP | B [auth A] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N |  | ||
| ACT Query on ACT | C [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
| MG Query on MG | D [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.30 Å
- R-Value Free:  0.159 (Depositor), 0.170 (DCC) 
- R-Value Work:  0.131 (Depositor), 0.140 (DCC) 
- R-Value Observed: 0.132 (Depositor) 
Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 46.844 | α = 90 |
| b = 62.336 | β = 90 |
| c = 88.345 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| MOSFLM | data reduction |
| SCALA | data scaling |
| PHASER | phasing |
Entry History 
Deposition Data
- Released Date: 2009-12-22  Deposition Author(s): De Diego, I., Kuper, J., Lehmann, F., Wilmanns, M.
Revision History (Full details and data files)
- Version 1.0: 2009-12-22
Type: Initial release - Version 1.1: 2011-05-08
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2019-07-24
Changes: Data collection - Version 1.4: 2023-12-13
Changes: Data collection, Database references, Derived calculations, Other, Refinement description
