doi: 10.1126/science.1065889.
Bayesian inference of phylogeny and its impact on evolutionary biology
Affiliations
- PMID: 11743192
- DOI: 10.1126/science.1065889
Item in Clipboard
Bayesian inference of phylogeny and its impact on evolutionary biology
Science.
.
Abstract
As a discipline, phylogenetics is becoming transformed by a flood of molecular data. These data allow broad questions to be asked about the history of life, but also present difficult statistical and computational problems. Bayesian inference of phylogeny brings a new perspective to a number of outstanding issues in evolutionary biology, including the analysis of large phylogenetic trees and complex evolutionary models and the detection of the footprint of natural selection in DNA sequences.
Similar articles
-
Identifiability of parameters in MCMC Bayesian inference of phylogeny.Syst Biol. 2002 Oct;51(5):754-60. doi: 10.1080/10635150290102429. Syst Biol. 2002. PMID: 12396589
-
Bayesian coestimation of phylogeny and sequence alignment.BMC Bioinformatics. 2005 Apr 1;6:83. doi: 10.1186/1471-2105-6-83. BMC Bioinformatics. 2005. PMID: 15804354 Free PMC article.
-
Are you my mother? Bayesian phylogenetic inference of recombination among putative parental strains.Appl Bioinformatics. 2003;2(3):131-44. Appl Bioinformatics. 2003. PMID: 15130798 Review.
-
Unraveling the evolutionary radiation of the thoracican barnacles using molecular and morphological evidence: a comparison of several divergence time estimation approaches.Syst Biol. 2004 Apr;53(2):244-64. doi: 10.1080/10635150490423458. Syst Biol. 2004. PMID: 15205051
-
Phylogeny estimation: traditional and Bayesian approaches.Nat Rev Genet. 2003 Apr;4(4):275-84. doi: 10.1038/nrg1044. Nat Rev Genet. 2003. PMID: 12671658 Review.
Cited by
-
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language.Syst Biol. 2016 Jul;65(4):726-36. doi: 10.1093/sysbio/syw021. Epub 2016 May 28. Syst Biol. 2016. PMID: 27235697 Free PMC article.
-
Alignment-free microbial phylogenomics under scenarios of sequence divergence, genome rearrangement and lateral genetic transfer.Sci Rep. 2016 Jul 1;6:28970. doi: 10.1038/srep28970. Sci Rep. 2016. PMID: 27363362 Free PMC article.
-
Ancestral sequence reconstruction - An underused approach to understand the evolution of gene function in plants?Comput Struct Biotechnol J. 2021 Mar 16;19:1579-1594. doi: 10.1016/j.csbj.2021.03.008. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 33868595 Free PMC article. Review.
-
Structural and Evolutionary Adaptation of NOD-Like Receptors in Birds.Biomed Res Int. 2021 Apr 29;2021:5546170. doi: 10.1155/2021/5546170. eCollection 2021. Biomed Res Int. 2021. PMID: 33997004 Free PMC article.
-
The origin of modern frogs (Neobatrachia) was accompanied by acceleration in mitochondrial and nuclear substitution rates.BMC Genomics. 2012 Nov 15;13:626. doi: 10.1186/1471-2164-13-626. BMC Genomics. 2012. PMID: 23153022 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Research Materials
