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@rcsb RCSB PDB

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    120 repositories

    • py-rcsb_workflow

      Public
      Python workflow entry points for database and search tools
      Python
      •
      Apache License 2.0
      •3•3•0•4•Updated Jan 12, 2026Jan 12, 2026

    • py-mmcif

      Public
      mmCIF Core Access Library
      C++
      •
      Other
      •14•49•6•0•Updated Jan 11, 2026Jan 11, 2026

    • py-rcsb_exdb

      Public
      Python
      •
      Apache License 2.0
      •3•0•0•0•Updated Jan 8, 2026Jan 8, 2026

    • py-rcsb_utils_struct

      Public
      Python
      •
      Apache License 2.0
      •4•0•0•0•Updated Jan 8, 2026Jan 8, 2026

    • rcsb-seqsearch

      Public
      Helm chart repository for the seqsearch service.
      Smarty
      •0•0•0•0•Updated Jan 7, 2026Jan 7, 2026

    • rcsb-stats

      Public
      Compute archive-wide statistics. Powered by RCSB Search API and BinaryCIF.
      statisticsprotein-data-bankprotein-structure-analysis
      Java
      •1•0•0•0•Updated Jan 7, 2026Jan 7, 2026

    • py-rcsb_utils_targets

      Public
      RCSB module containing methods for target data management
      Python
      •
      Apache License 2.0
      •0•0•2•0•Updated Jan 6, 2026Jan 6, 2026

    • py-rcsb_utils_seq

      Public
      Utility methods for processing polymer sequence data.
      Python
      •
      Other
      •4•0•0•0•Updated Dec 23, 2025Dec 23, 2025

    • symmetry

      Public
      🎡 Detect, analyze, and visualize protein symmetry
      Java
      •
      GNU Lesser General Public License v2.1
      •15•30•8•1•Updated Dec 19, 2025Dec 19, 2025

    • rcsb-util

      Public
      Common utilities for the RCSB infrastructure
      Java
      •
      MIT License
      •0•0•1•1•Updated Dec 19, 2025Dec 19, 2025

    • mmtf-java

      Public
      The java implementation of the MMTF API, decoder and encoder.
      Java
      •
      Apache License 2.0
      •10•11•5•2•Updated Dec 19, 2025Dec 19, 2025

    • rcsb-embedding-model

      Public
      Embedding model for structure similarity search
      Python
      •
      Other
      •3•9•0•0•Updated Dec 19, 2025Dec 19, 2025

    • rcsb-idmapper

      Public
      IdMapper service extracted from Arches
      Java
      •
      The Unlicense
      •1•1•2•0•Updated Dec 17, 2025Dec 17, 2025

    • py-rcsb_utils_citation

      Public
      A collection of Python Utility Classes for managing PDB citation data
      Python
      •
      Apache License 2.0
      •6•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • rcsb-documentation

      Public
      JavaScript
      •0•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • py-rcsb_utils_chemref

      Public
      Utilities for packaging PDB chemical reference data
      Python
      •
      Other
      •3•0•0•2•Updated Dec 15, 2025Dec 15, 2025

    • mmcif_website_file_assets

      Public
      PDBx/mmCIF Resource Site Dictionary and Schema File Assets
      Shell
      •0•1•0•0•Updated Dec 15, 2025Dec 15, 2025

    • rcsb-sequence-coordinates

      Public
      The RCSB PDB GraphQL service for amino/nucleic acid and identifier mapping
      JavaScript
      •
      MIT License
      •0•0•1•0•Updated Dec 12, 2025Dec 12, 2025

    • rcsb-mojave-model

      Public
      The RCSB data models
      Java
      •
      MIT License
      •0•1•0•0•Updated Dec 12, 2025Dec 12, 2025

    • py-rcsb_db

      Public
      RCSB Python Database Utility Classes
      Python
      •
      Other
      •5•11•4•1•Updated Dec 10, 2025Dec 10, 2025

    • py-rcsb_utils_dictionary

      Public
      RCSB dictionary method utilities
      Python
      •
      Apache License 2.0
      •2•1•3•1•Updated Dec 10, 2025Dec 10, 2025

    • py-rcsb_exdb_assets

      Public
      Python
      •
      Other
      •3•0•0•2•Updated Dec 9, 2025Dec 9, 2025

    • py-rcsb_utils_insilico3d

      Public
      RCSB utilities for accessing in silico 3D models and metadata from external data resources.
      Python
      •
      Apache License 2.0
      •0•3•0•0•Updated Dec 9, 2025Dec 9, 2025

    • py-rcsb_app_chem

      Public
      Chemical search services.
      Python
      •
      Apache License 2.0
      •0•0•0•2•Updated Dec 9, 2025Dec 9, 2025

    • py-rcsb_utils_seqalign

      Public
      Sequence alignment utilities
      Python
      •
      Other
      •3•0•1•0•Updated Dec 8, 2025Dec 8, 2025

    • py-rcsb_utils_go

      Public
      Gene Ontology Provider
      Python
      •
      Apache License 2.0
      •3•0•0•0•Updated Dec 8, 2025Dec 8, 2025

    • py-rcsb_utils_ec

      Public
      Utilities for accessing Enzyme Commission classification data
      Python
      •
      Apache License 2.0
      •3•0•0•0•Updated Dec 8, 2025Dec 8, 2025

    • py-rcsb_utils_validation

      Public
      Common utilities for calculating and accessing PDB validation data.
      Python
      •
      Apache License 2.0
      •4•0•0•0•Updated Dec 8, 2025Dec 8, 2025

    • py-rcsb_utils_taxonomy

      Public
      Common utilities for accessing NCBI taxonomy data
      Python
      •
      Other
      •3•1•0•0•Updated Dec 8, 2025Dec 8, 2025

    • py-rcsb_utils_multiproc

      Public
      Collection of multiprocessing utilities
      Python
      •
      Other
      •3•0•0•0•Updated Dec 8, 2025Dec 8, 2025